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UMR ECOSYS - Ecologie fonctionnelle et écotoxicologie des agroécosystèmes

Peer-reviewed Journals 2019 - UMR EcoSys


Abichou, M., De Solan, B., Andrieu, B., 2019. Architectural response of wheat cultivars to row spacing reveals altered perception of plant density. Frontiers in Plant Science, 10, article 999, 14 p.

Azouz, N., Drouet, J.-L., Beekmann, M., Siour, Wichink Kruit, R., Cellier, P., 2019. Comparison of spatial patterns of ammonia concentration and dry deposition flux between a regional Eulerian chemistry-transport model and a local Gaussian plume model. Air Quality, Atmosphere & Health, 12, 6, 719-729.

Barillot, R., Chambon, C., Fournier, C., Combes, D., Pradal, C., Andrieu, B., 2019. Investigation of complex canopies with a functional–structural plant model as exemplified by leaf inclination effect on the functioning of pure and mixed stands of wheat during grain filling. Annals of Botany, 123, 727-742.

Bart, S., Pelosi, C., Barraud, A., Pery, A., Cheviron, N., Grondin, V., Mougin, C., Crouzet, O., 2019. Earthworms mitigate pesticide effects on soil microbial activities, Frontiers in Microbiology, 10, article 1535, 11 p.

Baveye, P., Otten, W., Kravchenko, A., 2019. Editorial: Elucidating Microbial Processes in Soils and Sediments: Microscale Measurements and Modeling. Frontiers in Environmental Science, 7, article 78, 5 p.

Baveye, P., 2019. Expanding the frontier in education research: Teacher education could help promote activities that affect students' ability to learn in the long-run. Frontiers in Education, 3 (Article 120), 4 p.

Baveye, P., Wander, M., 2019. The (bio)chemistry of soil humus and humic substances: Why is the “new view” still considered novel after more than 80 years?. Frontiers in Environmental Science, 7, article 27, 6 p.,

Baveye, P., 2019. Pedometrics: How relevant is it to the research on soil processes?. Frontiers in Environmental Science, 7, article 44, 4p.

Boixel, A.-L., Delestre, G., Legeay, J., Chelle, M., Suffert, F., 2019. Phenotyping Thermal Responses of Yeasts and Yeast-like Microorganisms at the Individual and Population Levels: Proof-of-Concept, Development and Application of an Experimental Framework to a Plant Pathogen. Microbial Ecology, 78 (1), 42-56.

Cambier, P., Michaud, A., Paradelo, R., Germain, M., Mercier, V., Guérin-Lebourg, A., Revallier, A., Houot, S., 2019. Trace metal availability in soil horizons amended with various urban waste composts during 17 years – Monitoring and modelling. Science of the Total Environment, 651 (Part 2), 2961-2974.

Cardinael, R., Hoeffner, K., Chenu, C., Chevallier, T., Béral, C., Dewisme, A., Cluzeau, D., 2019. Spatial variation of earthworm communities and soil organic carbon in temperate agroforestry. Biology and Fertility of Soils. 55, 2, 171-183.

Chen, S., Arrouays, D., Angers, D., Chenu, C., Barré, P., Martin, M., Saby, N., Walter, C., 2019. National estimation of soil organic carbon storage potential for arable soils: A data-driven approach coupled with carbon-landscape zones. Science of the Total Environment, 666, 355-367.,

Chenu, C., Angers, D. A., Barré, P., Derrien, D., Arrouays, D., Balesdent, J., 2019. Increasing organic stocks in agricultural soils: Knowledge gaps and potential innovations. Soil and Tillage Research, 188, 41-52.

Clivot, H., Mouny, J.-C., Duparque, Dinh, Denoroy, P., Houot, S., Vertes, F., Trochard, R., Bouthier, A., Sagot, S., Mary, B., 2019. Modeling soil organic carbon evolution in long-term arable experiments with AMG model. Environmental Modelling and Software, 118, 99-113,

Crouzet, O., Consentino, L., Petraud, J. P., Marrauld, C., Aguer, J.-P., Bureau, S., Le Bourvellec, C., Touloumet, L., Berard, A., 2019. Soil photosynthetic microbial communities mediate aggregate stability: influence of cropping systems and herbicide use in an agricultural soil. Frontiers in Microbiology, 10, article 1319, 15 p.

Delon, C., Galy-Lacaux, Serça, Personne, E., Mougin, E., Adon, M., Le Dantec, V., Loubet, B., Fensholt, R., Tagesson, T., 2019. Modelling land–atmosphere daily exchanges of NO, NH3, and CO2 in a semi-arid grazed ecosystem in Senegal. Biogeosciences, 16 (9), 2049-2077.

Dollinger, J., Lin, C.-H., Udawatta, Pot, V., Benoit, P., Jose, S., 2019. Influence of agroforestry plant species on the infiltration of S-Metolachlor in buffer soils. Journal of Contaminant Hydrology, 225, 103498.

Dollinger, J., Jose, S., 2019. Correction to: Agroforestry for soil health. Agroforestry Systems, 93 (3), 1205-1205.

Ferrer Savall, J., Franqueville, D.Barbillon, P., Benhamou, C., Durand, P., Taupin, M.-L., Monod, H., Drouet, J.-L., 2019. Sensitivity analysis of spatio-temporal models describing nitrogen transfers, transformations and losses at the landscape scale. Environmental Modelling and Software, 111, 356-367.

Filipović, V., Coquet, Y., Gerke, H. H., 2019. Representation of Plot-Scale Soil Heterogeneity in Dual-Domain Effective Flow and Transport Models with Mass Exchange. Vadose Zone Journal, 18 (1), 0 doi:10.2136/vzj2018.09.0174

Geng, C., Zhuang, Y., Bergheaud, V., Garnier, P., Haudin, C.-S., 2019. Fate of 14C-acetyl sulfamethoxazole during the activated sludge process. Environmental Science and Pollution, 26, 10, 9832-9841.,

Goulas, A., Sertillanges, N., Brimo, K., Garnier, P., Bergheaud, V., Dumeny, V., Benoit, P., Haudin, C.-S., 2019. Environmental availability of sulfamethoxazole and its acetylated metabolite added to soils via sludge compost or bovine manure. Science of the Total Environment, 651, 506-515.

Gros, V., Genermont, S., Buysse, P., Bedos, C., Ciuraru, R., Loubet, B., Castell, J.-F., Cellier, P., Uzu, G., 2019. Colloque « Agriculture et qualité de l'air ». La Météorologie (106), 31.,

Hafner, S. D., Pacholski, A., Bittman, S., Carozzi, M., Chantigny, M., Genermont, S., Häni, C., Hansen, M. N., Huijsmans, J., Kupper, Misselbrook, T., Neftel, A., Nyord, Sommer, 2019. A flexible semi-empirical model for estimating ammonia volatilization from field-applied slurry. Atmospheric Environment, 199, 474-484.

Joimel, S., Schwartz, Maurel, N., Magnus, Machon, N., Bel, J., Cortet, J., 2019. Contrasting homogenization patterns of plant and collembolan communities in urban vegetable gardens. Urban Ecosystems, 22 (3), 553-566. , 

Kemgue, A. T., Monga, O., Moto, S., Pot, V., Garnier, P., Baveye, P., Bouras, A., 2019. From spheres to ellipsoids: Speeding up considerably the morphological modeling of pore space and water retention in soils. Computers and Geosciences, 123, 20-37.

Kravchenko, A., Otten, W., Garnier, P., Pot, V., Baveye, P., 2019. Soil aggregates as biogeochemical reactors: Not a way forward in the research on soil‐atmosphere exchange of greenhouse gases. Global Change Biology, 25, 2205-2208.

Kyulavski, V., Recous, S., Garnier, P., Paillat, J.-M., Thuriès, 2019. Application of N Fertilizer to Sugarcane Mulches: Consequences for the Dynamics of Mulch Decomposition and CO2 and N2O Fluxes. BioEnergy Research, 12, 3, 484-496.

Kyulavski, V., Recous, S., Thuries, L., Paillat, J., Garnier, P., 2019. Investigating interactions between sugarcane straw and organic fertilizers recycled together in a soil using modelling of C and N mineralization. European Journal of Soil Science,

LeCarpentier, C., Barillot, R., Blanc, E., Abichou, M., Goldringer, I., Barbillon, P., Enjalbert, J., Andrieu, B., 2019. WALTer: a three-dimensional wheat model to study competition for light through the prediction of tillering dynamics. Annals of Botany, 123, 6, 961-975.

Lerch, T., Dignac, M.-F., Thevenot, M., Mchergui, C., Houot, S., 2019. Chemical changes during composting of plant residues reduce their mineralisation in soil and cancel the priming effect. Soil Biology and Biochemistry, 136, 107525,

Lichiheb, N., Myles, Personne, E., Heuer, M., Buban, M., Nelson, A. J., Koloutsou-Vakakis, S., Rood, M. J., Joo, E., Miller, Bernacchi, C., 2019. Implementation of the effect of urease inhibitor on ammonia emissions following urea-based fertilizer application at a Zea mays field in central Illinois: A study with SURFATM-NH3 model. Agricultural and Forest Meteorology, 269-270, 78-87.,

Loiseau, T., Chen, S., Mulder, V. L., Roman Dobarco, M., Richer de Forges, A., Lehmann, S., Bourennane, H., Saby, N., Martin, M., Vaudour, E., Gomez, C., Lagacherie, P., Arrouays, D., 2019. Satellite data integration for soil clay content modelling at a national scale. International Journal of Applied Earth Observation and Geoinformation, 82, article 101905.

Lutfalla, S., Barré, P., Bernard, S., Le Guillou, C., Alléon, Chenu, C., 2019. Multidecadal persistence of organic matter in soils: multiscale investigations down to the submicron scale. Biogeosciences, 16 (7), 1401-1410.

Moinet, G., Midwood, A., Hunt, Rumpel, C., Millard, Chabbi, A., 2019. Grassland Management Influences the Response of Soil Respiration to Drought. Agronomy, 9 (3), 124.,

Paradelo, R., Eden, M., Martínez, I., Keller, T., Houot, S., 2019. Soil physical properties of a Luvisol developed on loess after 15 years of amendment with compost. Soil and Tillage Research, 191, 207-215.

Paradelo, R., Lerch, T., Houot, S., Dignac, M.-F., 2019. Composting modifies the patterns of incorporation of OC and N from plant residues into soil aggregates. Geoderma, 353, 415-422.

Pesce, S., Casado-Martinez, C., Aphoteloz-Perret-Gentil , L., Bonnineau, C., Bouchez, A., Cheviron, N., Coquery, M., Dabrin, A., Daouk, S., De Alencastro , L., Degli-Esposti, D., Dubois, N., Egea, E., Folly , E., Foulquier, A., Gateuille, D., Gouy, V., Lafont, M., Laluc , M., Lodz-Crozet , B., Loizeau, J. l., Lyautey, E., Martin-Laurent, F., Masson, M., Mendoza-Lera, C., Mondy, S., Monier, J.-M., Montuelle, B., Mougin, C., Mulattieri , P., Naffrechoux, E., Neyra, M., Perceval, O., Reyjol, Y., Rossi, M., Santiago , S., Slaveykova, V. I., Staub , P.-F., Tlili , A., Vivien , R., Wermeille , C., Yari , A., Ferrari, B. J. D., 2019. Recommendations from a French-Swiss expert panel for improving the ecotoxicological quality assessment of sediments through the study of benthic communities. Sciences, Eaux et Territoires, 8 p.

Puche, N., Senapati, N., Flechard, C., Klumpp, K., Kirschbaum, M. U., Chabbi, A., 2019. Modeling Carbon and Water Fluxes of Managed Grasslands: Comparing Flux Variability and Net Carbon Budgets between Grazed and Mowed Systems. Agronomy, 9 (4), 183.

Ramanantenasoa Radomahaleo, M. M. J., Genermont, S., Gilliot, J.-M., Bedos, C., Makowski, D., 2019. Meta-modeling methods for estimating ammonia volatilization from nitrogen fertilizer and manure applications. Journal of Environmental Management, 236, 195-205.,

Reitzel, K., Bennett, Berger, N., Brownlie, W. J., Bruun, S., Christensen, M. L., Cordell, D., van Dijk, K., Egemose, Eigner, H., Glud, Grönfors, O., Hermann, L., Houot, S., Hupfer, M., Jacobs, B., Korving, L., Kjærgaard, C., Liimatainen, H., Van Loosdrecht, M. C., Macintosh, K. A., Magid, Maia, F., Martin-Ortega, J., McGrath, Meulepas, R., Murry, M., Neset, T.-S., Neumann, G., Nielsen, U. G., Nielsen, O’Flaherty, V., Qu, H., Santner, J., Seufert, V., Spears, Stringer, Stutter, M., Verburg, Wilfert, P., Williams, Metson, G. S., 2019. New Training to Meet the Global Phosphorus Challenge. Environmental Science & Technology, 53 (15), 8479-8481.

Rumpel, C., Amiraslani, F., Chenu, C., Garcia Cardenas, Kaonga, Koutika, Ladha, Madari, Shirato, Smith, Soudi, Soussana, J.-F., Whitehead, Wollenberg, 2019. The 4p1000 initiative: Opportunities, limitations and challenges for implementing soil organic carbon sequestration as a sustainable development strategy. Ambio10.1007/s13280-019-01165-2

Rumpel, C., Amiraslani, F., Chenu, C., Cardenas, M. G., Kaonga, M., Koutika, L.-S., Ladha, J., Madari, B., Shirato, Y., Smith, P., Soudi, B., Soussana, J.-F., Whitehead, D., Wollenberg, E., 2019. Response to “The “4p1000” initiative: A new name should be adopted” by Baveye and White (2019). Ambio.10.1007/s13280-019-01209-7

Saba, D., Manouchehri, N., Besançon, S., El Samad, O., Rana Baydoun, Bou Khozam, R., Nafeh Kassir, L., Kassouf, A., Chebib, H., Ouaini, N., Cambier, P., 2019. Bioaccessibility and radioisotopes of lead in soils around a fertilizer industry in Lebanon . Environmental Geochemistry and Health,

Soucémarianadin, L., Cécillon, L., Chenu, C., Baudin, F., Nicolas, M., Girardin, C., Delahaie, Barré P., 2019. Heterogeneity of the chemical composition and thermal stability of particulate organic matter in French forest soils. Geoderma, 342, 65-74.

Stella, P., Loubet, B., de Berranger, C., Charrier, X., Ceschia, E., Gerosa, G., Finco, A., Lamaud, E., Serça, D., George, C., Ciuraru, R., 2019. Soil ozone deposition: Dependence of soil resistance to soil texture. Atmospheric Environment, 199, 202-209.

Tuzet A.Rahantaniaina M.S., Noctor G., 2019. Analyzing the Function of Catalase and the Ascorbate–Glutathione Pathway in H2O2 Processing: Insights from an Experimentally Constrained Kinetic Model. Antioxidants and Redox Signaling, 30, 9.

Vaudour, E., Gomez, C., Fouad, Y., Lagacherie, P., 2019. Sentinel-2 image capacities to predict common topsoil properties of temperate and Mediterranean agroecosystems. Remote Sensing of Environment, 223, 21-33,

Vidal, T., Andrieu, B., 2019. Contrasted phenotypes emerging from stable rules: A model based on self-regulated control loops captures the dynamics of shoot extension in contrasted maize phenotypes. Annals of Botany

Von Cossel, M., Lewandowski, Elbersen, B., Staritsky, Van Eupen, Iqbal, Y., Mantel, S., Scordia, D., Testa, Cosentino, Maliarenko, O., Eleftheriadis, I., Zanetti, F., Monti, Lazdina, D., Neimane, Lamy, I., Ciadamidaro, L., Sanz, M., Esteban Carrasco, Ciria, McCallum, I., Trindade, L. M., Van Loo, E. N., Elbersen, W., Fernando, A. L., Papazoglou, E. G., Alexopoulou, 2019. Marginal Agricultural Land Low-Input Systems for Biomass Production. Energies, 12 (16),

Wohlfahrt, J., Frechaud, F., Gabrielle, B., Godard, C., Kurek, B., Loyce, C., Therond, O., 2019. Characteristics of bioeconomy systems and sustainability issues at the territorial scale. A review. Journal of Cleaner Production, 232, 898-909.